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Towards Sustainable Agriculture: Development of an Aromatic Rice Variety with Strong Roots, High Yield, and Enhanced Tolerance of Drought Stress

:::HOME / LIFE SCIENCES / Towards Sustainable Agriculture: Development of an Aromatic Rice Variety with Strong Roots, High Yield, and Enhanced Tolerance of Drought Stress
Towards Sustainable Agriculture: Development of an Aromatic Rice Variety with Strong Roots, High Yield, and Enhanced Tolerance of Drought Stress

To cope with global climate change that is causing great loss of crop productivity, and to meet the high demands of a rapidly expanding population for food supply in the next few decades, integration of advanced biotechnologies into conventional breeding programs to accelerate the process of crop improvement has become an urgent task. Improved rice varieties with higher yield, increased nutrition, and a reduced environmental footprint are projected to be achieved by using less land, less water and being resilient under more severe environmental stresses, as well as effective genetic approaches. The marker assisted backcross breeding (MABB) method that is precise, rapid, and efficient, has become a popular molecular breeding technology for crop improvement. Our previous studies have discovered that ectopic expression of a mutated enzyme GA2ox6 that inactivates plant hormone GA led to reduced plant height, increased productive tillers, an expanded root system, higher water use efficiency, enhanced photosynthesis rate, and elevated abiotic and biotic stress tolerance in transgenic rice. Recently, we have successfully integrated the GA2ox6 locus from a stress tolerant wild rice accession N22 into the popular Taiwanese aromatic rice variety TNG71 (Yi Quan aromatic rice) following the MABB approach. The newly bred rice variety has a stronger root system, enhanced drought tolerance, and increased grain yield (by 30%) compared with the parent TNG71 under both normal and water deficit conditions in the field. The success of our breeding efforts suggests that the integration of advanced molecular breeding technologies into conventional breeding programs offers an effective approach to improving rice varieties with desirable agronomic traits.


 

Breeding new rice varieties with favorable palatability, high yield, and enhanced resistance to environmental stress and diseases is currently a major task for crop improvement. To achieve this goal, our team has followed the marker assisted backcross breeding (MABB) approach in the rice breeding program. The MABB approach offers rapid and precise selection for desirable agronomic traits and effective integration of beneficial target genes from donor variety to recipient variety, which is considered as a highly efficient approach to the molecular breeding of crops. 

TNG71 (Yi Quan rice), a popular aromatic rice cultivar, was the first elite rice variety to be assigned a trade name in Taiwan. Its annual planting area exceeds 1,000 hectares in Taiwan, with a market value estimated at NT$4.4 billion. However, intolerance to biotic stress (such as diseases) and abiotic stress (such as drought) has limited the further expansion for growing TNG71.

The newly bred rice variety has similar morphology to the parent variety TNG71, except for more tillers and higher grain yield.
The newly bred rice variety has similar morphology to the parent variety TNG71, except for more tillers and higher grain yield.
 
Plant height and tillering that directly link to grain yield in cereals are tightly regulated by the hormone gibberellins (GAs), and GA 2-oxidase (GA2ox) is a key enzyme inactivating endogenous GAs and their biosynthesis precursors. Previously, we identified a unique class of GA2ox, GA2ox6, which regulates the overall architecture (height, tiller number, and root system) of rice. We discovered that ectopic expression of mutated GA2ox6 moderately lowered GA levels, leading to reduced plant height, more productive tillers, an expanded root system, higher water use efficiency, an enhanced photosynthesis rate, and elevated abiotic and biotic stress tolerance in rice. GA2ox6 was thus considered a useful molecular marker for the breeding of rice with enhanced abiotic stress tolerance while maintaining high yield.
 
Ectopic expression of mutated GA2ox6 moderately lowered GA levels, leading to reduced plant height, more productive tillers, higher grain yield, and elevated abiotic and biotic stress tolerance in rice. (*WT: wild type)
Ectopic expression of mutated GA2ox6 moderately lowered GA levels, leading to reduced plant height, more productive tillers, higher grain yield, and elevated abiotic and biotic stress tolerance in rice. (*WT: wild type)
 
Drought stress tolerance is enhanced in GA deficient transgenic rice. Six 4-day-old seedlings were transferred to soil in the same pot and cultivated with 1/3 Kimura solution for 20 days. Plants were then dehydrated for 11 days and re-watered for 3 days. Survival rates (%) were determined after re-watering. NT: non-transformed plants
Drought stress tolerance is enhanced in GA deficient transgenic rice. Six 4-day-old seedlings were transferred to soil in the same pot and cultivated with 1/3 Kimura solution for 20 days. Plants were then dehydrated for 11 days and re-watered for 3 days. Survival rates (%) were determined after re-watering. (*NT: non-transformed plants)
 
The wild rice accession N22 is highly tolerant to drought, but its seeds have a long awn and do not possess favorable palatability. We observed that the mRNA level of GA2ox6 in N22 is higher than that in TNG71 under normal and drought conditions, and thus used N22 as donor parent of the GA2ox6 locus for integration into the recipient parent TNG71. During the continuous backcross and selection processes, DNA markers flanking GA2ox6 from N22 were used to trace the backcrossed offspring for retaining the lineage of the aroma trait in TNG71 but allowing integration of the GA2ox6 gene from N22. The newly bred rice variety exhibits beneficial traits, such as a stronger root system, enhanced drought tolerance, and increased grain yield by 30% as compared to TNG71 under both normal and water deficit conditions. We plan to conduct more field trials for the new rice variety in the future testing whether optimized root architecture could enhance water and fertilizer uptake and use efficiency.
 
Newly bred rice varieties have stronger root systems
Newly bred rice varieties have stronger root systems
 
 
The agro-morphological traits and yield related components of the new rice variety were compared with both parents in the field trial with or without irrigation in the 2nd cropping season of 2016.
The agro-morphological traits and yield related components of the new rice variety were compared with both parents in the field trial with or without irrigation in the 2nd cropping season of 2016.

Our research has demonstrated that the integration of advanced molecular breeding technologies to the conventional breeding offers an effective approach to improving rice varieties in Taiwan.

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